Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28547g00001 ATGGTTGCTATTCCATTGGAAGAAGTGCCAAGCAAGATAAGAGGACTAGTAAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATCTGAAGAAAATCAACAAAGGCTCAAACATTGTGATATTGGACTCGTACTCGGACTCGGCAAAGATAGTTGCAAGAACGCTAACGGGGCTTGGATTTAAGAACACATGGATAGTTGGTGATGGATTTTCTGGAGGCAAAGGGTGGTTACAAAGTAGATTAGGAACGGATTNNNTNNNNNNNNNNTTTGCAGAGATCTTGTCTCCATCAAGAATCATCCCTGCAGGTGGTACTAGAAGTTTTGGAACAACCAGCAGGCAGAAACTTCTTCCTGGAGCTGACTGA 384 0.4089 MVAIPLEEVPSKIRGLVRNVKRVEAEIAALKISYLKKINKGSNIVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGKGWLQSRLGTDXXXXXFAEILSPSRIIPAGGTRSFGTTSRQKLLPGAD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28547g00001 127 Gene3D - 7 95 IPR036873 -
Trme28547g00001 127 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 1 89 IPR044690 GO:0009704|GO:0071277|GO:0090333
Trme28547g00001 127 ProSiteProfiles Rhodanese domain profile. 23 91 IPR001763 -
Trme28547g00001 127 Coils Coil 13 33 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28547g00001 1 49 Sulfurtransferasese or Rhodanese AT5G23060 79.592 5.06e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28547g00001 - - tpra:123923811 227.254