Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2851g00001 ATGCTTTGGCAGGAGTGTTTTGATCCCATTGTTGCAATATCTGGTCGTGACCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAATTCGGGGGAATGTATTGCATTGTTTTAATTGTGAATTCTGTCGTAGTATCTGCCGGGCTTCTTAGGATTTTTGGCTGCAACATTGCTGAGCTTCCCCTGGTTGCTACAAGTAGAGAGCATCAAGGAAAAGGTTATTTTCAAGTGCTGTTCTCTTGCATAGAGAGGTTGTTGTCTTCTCTAAATGTAGAAAAGCTGGTGCTCCCTGCTGCAGGGGATGCAGAGTCAATTTGGACTAAGAAATTAGGCTTTCACAAGATGAGTGAAGATCAGGACTTGAATGGTATTCTGGTTTTGAGATATTCTTCTATGGTAGTTAGCCTCATGTATGTTAGATTTCATTTTGCAAGCAGAGACTTCAGGGTGTTGGCTTTATCCAAATATCTTAAAGAGGTGCAGCTCACCCTCTTCAACAAAACTTCAGTGCTGGAGAAGACTGTGCAGCTGGTGACGGAATGA 552 0.4239 MLWQECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGCNIAELPLVATSREHQGKGYFQVLFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFHKMSEDQDLNGILVLRYSSMVVSLMYVRFHFASRDFRVLALSKYLKEVQLTLFNKTSVLEKTVQLVTE 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2851g00001 183 PANTHER AUTOIMMUNE REGULATOR 4 176 - -
Trme2851g00001 183 Gene3D - 25 138 - -
Trme2851g00001 183 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 34 121 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2851g00001 Trme-Chr2851 360 2343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2851g00001 2 183 PHD Transcription Factor Family AT3G53680 59.341 1.23e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2851g00001 - - tpra:123904992 273.092