Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28501g00002 ATGGACCTCTTTGAAAAGTGCATAGAGATTGTCAAAAGGTGCTTTGTTGATTCTGGAATGGACATGAGTAGCGTTGATGATGTTGTCCTTATCGGCGGCTCGTCTAGAATCCCCAAATTGCAGCAGCTACTGCAAAACTTTTTTAAGGGGAAGGATTTGTATAGTAGCATCAACCCGGATGAGGCTGTGGCTTATGGTGCAGCTGTTCAAGCTGCTTTGCTTTGTGAAGGTATTAAGAATGTTCCAAATTTGGTACTGCAAGATGTTACACCGTTGTCCCTTGGTGTAGAAGTTATAGGAGAGCTCATGAGTATTGTGATTCCAAGGAACACGCCCATTCCTGTCAAGATGACAAAAGGATATGATACAGCTGATGATAACTGTTCTGAAGCTAAAATTGAGGTTTATGAGGGCGAGAGTTTAAAAGCCAGTGAAAACAACTTGCTCGGTTTGTTTAATCTCCCAACTCCTCGTGCTTCNGGACTAAGAAAGATATTACAATAA 504 0.4167 MDLFEKCIEIVKRCFVDSGMDMSSVDDVVLIGGSSRIPKLQQLLQNFFKGKDLYSSINPDEAVAYGAAVQAALLCEGIKNVPNLVLQDVTPLSLGVEVIGELMSIVIPRNTPIPVKMTKGYDTADDNCSEAKIEVYEGESLKASENNLLGLFNLPTPRASGLRKILQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28501g00002 167 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 76 165 IPR029047 -
Trme28501g00002 167 SUPERFAMILY Actin-like ATPase domain 2 74 IPR043129 -
Trme28501g00002 167 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 84 157 IPR029047 -
Trme28501g00002 167 Pfam Hsp70 protein 2 155 IPR013126 GO:0005524|GO:0140662
Trme28501g00002 167 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Trme28501g00002 167 Gene3D - 7 57 - -
Trme28501g00002 167 PANTHER HEAT SHOCK PROTEIN 70KDA 1 155 IPR013126 GO:0005524|GO:0140662
Trme28501g00002 167 Gene3D - 58 72 - -
Trme28501g00002 167 PRINTS 70kDa heat shock protein signature 57 77 - -
Trme28501g00002 167 PRINTS 70kDa heat shock protein signature 25 41 - -
Trme28501g00002 167 PRINTS 70kDa heat shock protein signature 83 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28501g00002 Trme-Chr28501 487 990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28501g00002 1 159 Calmodulin-binding Proteins AT3G12580 59.146 5.95e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28501g00002 K03283 - gmx:102667578 204.527