Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28501g00001 AATGCAGTGGTTACAGTTCCGGCGTATTTCAATGATTCTCAACGAAAAGCCACAAAAGATGCTGGTTCTATTGCTGGCCTGAATGTAATGCGGATAATCAATGAACCAACTGCGGCTGCTCTTGCATATGGCCTTCAAAAAAGAACTAATTGTGTTGAAGAGAGAAACATCTTCATCTTTTATCTTGGTGGTGGAACTTTTGATGTATCTCTCCTCACAATTAAGGATAATGTTTTTAAAGTTAAGGCCACTGCTGGAGACACTCACCTTGGAGGAGAGGACTTCGATAATAGAATGGTGAATCACTTTGTAGAGGAGTTCAAGAGGAAGAACAAAGCGGACATCAGTGCAAAACCAGGATTATTNNNNNNNNGGAAGAACAAAGCGGACATCAGTGCAAAACCAGGATCATTGAGCTAG 420 0.4048 NAVVTVPAYFNDSQRKATKDAGSIAGLNVMRIINEPTAAALAYGLQKRTNCVEERNIFIFYLGGGTFDVSLLTIKDNVFKVKATAGDTHLGGEDFDNRMVNHFVEEFKRKNKADISAKPGLXXXXKNKADISAKPGSLS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28501g00001 139 Gene3D - 58 119 - -
Trme28501g00001 139 FunFam Endoplasmic reticulum chaperone BiP 1 59 - -
Trme28501g00001 139 Gene3D - 1 57 - -
Trme28501g00001 139 PANTHER HEAT SHOCK PROTEIN 70KDA 1 119 IPR013126 GO:0005524|GO:0140662
Trme28501g00001 139 MobiDBLite consensus disorder prediction 118 139 - -
Trme28501g00001 139 PRINTS 70kDa heat shock protein signature 2 22 - -
Trme28501g00001 139 PRINTS 70kDa heat shock protein signature 65 75 - -
Trme28501g00001 139 SUPERFAMILY Actin-like ATPase domain 2 118 IPR043129 -
Trme28501g00001 139 Pfam Hsp70 protein 1 121 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28501g00001 Trme-Chr28501 2 421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28501g00001 1 119 Calmodulin-binding Proteins AT5G02500 79.832 1.38e-64 203