Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme284454g00001 ATGGGTTTTCGTTTACCTGGTAAAATCAGATCAAGGGCAACATCTTCAAAAGGCGTGGACGTGCCTAAAGGATATCTAGCAGTATACGTTGGAGAAGAAATGAAGCGGTTTGTGATCCCCATATCATACTTGTACCAACCATCGTTTCAAGAATTGTTGAACCAAGCTGAGGAACAATTCGAATATGATCATCCAA 196 0.4082 MGFRLPGKIRSRATSSKGVDVPKGYLAVYVGEEMKRFVIPISYLYQPSFQELLNQAEEQFEYDHP 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme284454g00001 65 Pfam Auxin responsive protein 14 64 IPR003676 GO:0009733
Trme284454g00001 65 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 65 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme284454g00001 Trme-Chr284454 1 196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme284454g00001 20 64 Calmodulin-binding Proteins AT3G43120 57.778 2.35e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme284454g00001 - K14488 gmx:100787155 102.834