Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28406g00001 ATGCGTGACCTAATAATTCTAGAGTTTGAGTCTTTGTTCCGTGATCAATACAGTGGATCCCTACAAAACGAAGCAACGACAATTTGCTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGACTCTCATTCGGCAAAATTCGATAGAGGAAGTGAATCTCTTTGGTGAACTTCACCCGATCACCAGTTACGTGATGAATTGTGTATGTGCTGCTAGTCGGTCACGGAAGACCCTGGAGCAAGTTTTTGATGGAGATTATGGGGATCCATTGAAGGAATATCCGGAAATTGAGGATAGAGTGCATCATTCCTCATCCAATCTCTCAGGGCAGATGAGTTTGATTATGAAGCTATTGAAGAGGAAGTTGATAGACGAATCCAAACTCTATGCCACGTTAAACAGGATGACTTATTTGTCTCTAAGTTTCTTGGTCAGAAACGGCAACTACATTGTTCAAAAGGCTAAAGAGTGTGAATTAGGAACTATTTTAGGAGATGATTGGTTCAAAAATCAGTCTAACCAATTTGGCCAGTTTAGTTTACTTCTTATTGAAAATGGAAAGCGGCATCCTTGTAGACTTAACCAAGAAATAAAACGAGAAGAAGAGGAACGGATGCGTATGTTGGCCATGGGTAGGCCACCAATTAACTCGATAAGACAAAGAAGAACTTCTTATGAAACGTCAAGCTTTATCAAACTCGGGAACCGGTCCCCACGACATTGGTAG 738 0.3862 MRDLIILEFESLFRDQYSGSLQNEATTICXXXXXXXXXXXXXXXTLIRQNSIEEVNLFGELHPITSYVMNCVCAASRSRKTLEQVFDGDYGDPLKEYPEIEDRVHHSSSNLSGQMSLIMKLLKRKLIDESKLYATLNRMTYLSLSFLVRNGNYIVQKAKECELGTILGDDWFKNQSNQFGQFSLLLIENGKRHPCRLNQEIKREEEERMRMLAMGRPPINSIRQRRTSYETSSFIKLGNRSPRHW 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28406g00001 245 Gene3D Exocyst complex component Exo70 1 193 - -
Trme28406g00001 245 Pfam Exo70 exocyst complex subunit 7 182 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme28406g00001 245 SUPERFAMILY Cullin repeat-like 48 179 IPR016159 -
Trme28406g00001 245 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 183 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28406g00001 Trme-Chr28406 420 1157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28406g00001 1 184 EXO70 exocyst subunit family AT5G58430 41.304 1.74e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28406g00001 K07195 - tpra:123922987 226.868