Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28347g00001 ATGAATAACGATGGAAGTGACTATGGAAGTTGGGAAGGTGGGAGCTATTTGCATGATGATGGAGATGATTTTGATGATCTACATGATGGCACTGATGAGGATGAGGATGATGACGATGAAGATGATGATAACGAGGAGGAATATGAAGAAGATGAAGACGCATTTGATGTCCATGCTCATGCTACTGTTGGTGAAAATGATAATCCTGTCATTGAATTTGACCCAGAGCTGTTTTCAAGCGATGAAGCCTATGCAAGAGCATTACAGGAGGCTGAAGAGAGGGAAATGGCAGCTAGACTGCTGGCTCTTGCTGGAATACATGATC 325 0.4308 MNNDGSDYGSWEGGSYLHDDGDDFDDLHDGTDEDEDDDDEDDDNEEEYEEDEDAFDVHAHATVGENDNPVIEFDPELFSSDEAYARALQEAEEREMAARLLALAGIHD 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28347g00001 108 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 1 108 IPR043312 -
Trme28347g00001 108 MobiDBLite consensus disorder prediction 1 55 - -
Trme28347g00001 108 MobiDBLite consensus disorder prediction 25 53 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28347g00001 1 106 C3H Transcription Factor Family AT3G19910 44.643 9.30e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28347g00001 K19045 - gmx:100787418 108.997