Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28273g00001 ATGCTCGACGTGTTTGAAACATTGGGCGACCTAATTCCGAATTTTGAGTCTCTTTTTTGTGATCAATACAGTGTATCACTAACTAATGAAGCAAACACAGTTTTGAAGAAATTGGGAAAAGCAATAGTGTGCATTTTCATGGAGTTGGAAAATGTGATTCGCCAAGATCAGACGAATGCGCCAGTTCTTGGTGGCGGGCTTCACCCCATTGTTCGTTACATAATGAATTACCTAACCACCACATATGACTACCATGATATACTGGAGCAGGTATTTGAAGACCATGGACATATGTTGCAGGAATACCTCAAGCTTGATGATAATGTGCCCTCCTCTTCCTCTTTTTCACTGCAGATGGAACGGATTATGGAGGTATTGGAGACTAATTTGGAAGCCAAGTCCAAAATTTATAAAGACCCTGCTTTGTGCTGTATTTTCTTAATGAATAGCAGCAAGTACATAATTCGGAAGACGGAAGGTAGTGACTTAAGGGCTCTTTTTGCGAATGGCTTGTTTGAAAGACACCAAGCAAAATCACGGCACAACTATGAGCAATATCTGAGAATCTCATGGAATAAGGTGCAAGGGTTTCTAAACCTGGACAACAATGGATTAGTGCTTCCTGATATGGTAGAGAAGTCAATGAAGGAGAAGCTAGAATCTTTCAACATACTGTTTGAGGAAATATGCAGGGTTCAATCTTTGTGGTTTGTCTTGGATAAAGAGTTTAGGGAAGAAATAATAACTTCCATTGGGGAAATCTTGTTGCCAGCCTACGGAAACTTCATTCAGAGGTTCCAGAGTGTTCTGGAACTTGGAAAGCATGCTGATCATAGCTATACTATTAAGTATGGATTGGAGGATATTGAAGCAAGACTCAACGATTTGTTTCAGAGAATCATTCGATAA 909 0.3982 MLDVFETLGDLIPNFESLFCDQYSVSLTNEANTVLKKLGKAIVCIFMELENVIRQDQTNAPVLGGGLHPIVRYIMNYLTTTYDYHDILEQVFEDHGHMLQEYLKLDDNVPSSSSFSLQMERIMEVLETNLEAKSKIYKDPALCCIFLMNSSKYIIRKTEGSDLRALFANGLFERHQAKSRHNYEQYLRISWNKVQGFLNLDNNGLVLPDMVEKSMKEKLESFNILFEEICRVQSLWFVLDKEFREEIITSIGEILLPAYGNFIQRFQSVLELGKHADHSYTIKYGLEDIEARLNDLFQRIIR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28273g00001 302 Gene3D Exocyst complex component Exo70 1 300 - -
Trme28273g00001 302 SUPERFAMILY Cullin repeat-like 1 297 IPR016159 -
Trme28273g00001 302 Pfam Exo70 exocyst complex subunit 1 295 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme28273g00001 302 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 298 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28273g00001 Trme-Chr28273 199 1107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28273g00001 1 298 EXO70 exocyst subunit family AT5G58430 50.000 5.90e-94 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28273g00001 K07195 - psat:127118479 385.571