Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme282711g00001 GTTACAATGAGGAAACCAGTCACTAAGAAAGTTTCTTCTGGAAGTCCGTGGTACGGTCCAGACCGTGTCAAGTATTTAGGCCCATTCTCTGGTGAAGCACCATCTTACCTCACTGGTGAATTTCCTGGCGATTATGGTTGGGATACTGCAGGGCTATCTGCTGACCCAGAGACATTTGCCAAAAACCGTGAACTCGAGATCATCCACAGTAGATGGGCTATGTTGGGAGCTTTGGGATGTGTCTTCCCTGACTTTTAG 258 0.4767 VTMRKPVTKKVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEIIHSRWAMLGALGCVFPDF 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme282711g00001 85 Gene3D Chlorophyll a/b binding protein domain 24 85 - -
Trme282711g00001 85 SUPERFAMILY Chlorophyll a-b binding protein 16 85 - -
Trme282711g00001 85 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 84 IPR001344 GO:0009765|GO:0016020
Trme282711g00001 85 Pfam Chlorophyll A-B binding protein 33 84 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme282711g00001 Trme-Chr282711 2 259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme282711g00001 1 85 Chloroplast and Mitochondria Gene Families AT1G29910 87.209 2.39e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme282711g00001 K08912 - sspl:121754967 176.022