Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28265g00001 GAGAAGGAATCTTGGGATATGAGCACTGAAGAGAAAATTGAAGCTGCTGGTAAAAAGAAAGAAGAAGGAAATGTTTTGTTTAAAGCTGGTAAATATGCAAGAGCTTCCAAAAGATATGAGAAGGCTGTGAAGTACATAGAGTATGATTCCTCCTTCAGTGATGAGGAGAAAAAGCTGTCAAAGACCTTGAAGATTGCTTCCTTATTAAACAATGCTGCTTGCAAGTTGAAGTTGAAAGAGTACAAAGATGCAGAGAAATTGTGTACTAAGGTTTTGGACATTGAGAGCACAAACGTTAAAGCCCTCTATAGAAGGGCCCAAGCAAGTATACAGTTAACTGACTTGGATTTGGCTGAAATTGACATTAAAAAAGCTCTTGAGGTTGATCCTGACAACAGGGAAGTAAAGCTGGAGTACAGGAATTTGAAGGAAAAGGTTAAGGAGTACAATAAAAAGCAGGCGAAATTTTATGGAAACATGTTCAGCTTGACAAAGTCTTGA 501 0.3792 EKESWDMSTEEKIEAAGKKKEEGNVLFKAGKYARASKRYEKAVKYIEYDSSFSDEEKKLSKTLKIASLLNNAACKLKLKEYKDAEKLCTKVLDIESTNVKALYRRAQASIQLTDLDLAEIDIKKALEVDPDNREVKLEYRNLKEKVKEYNKKQAKFYGNMFSLTKS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28265g00001 166 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 7 162 IPR039663 -
Trme28265g00001 166 Pfam Tetratricopeptide repeat 100 132 IPR019734 GO:0005515
Trme28265g00001 166 ProSiteProfiles TPR repeat profile. 99 132 IPR019734 GO:0005515
Trme28265g00001 166 SUPERFAMILY TPR-like 4 161 IPR011990 GO:0005515
Trme28265g00001 166 Gene3D Tetratricopeptide repeat domain 2 159 IPR011990 GO:0005515
Trme28265g00001 166 Coils Coil 132 152 - -
Trme28265g00001 166 SMART tpr_5 65 98 IPR019734 GO:0005515
Trme28265g00001 166 SMART tpr_5 99 132 IPR019734 GO:0005515
Trme28265g00001 166 SMART tpr_5 16 49 IPR019734 GO:0005515
Trme28265g00001 166 FunFam Peptidylprolyl isomerase 4 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28265g00001 Trme-Chr28265 300 1106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28265g00001 1 162 Calmodulin-binding Proteins AT3G25230 77.160 3.91e-83 253