Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28242g00001 ATGGCTCTACCAACCTCAAATTCTGGTCTTGAACTTGGTATTGGAAGGAATGGATTTGGTGGTGGTTCAAGCTCTCACGGCACTTCCTTACCAATGGGACTTGATCTTGGAGATGGTCCTGCGATGCATGGTATTAGATCGCCAATGGGATTGATGGGAAATAGTAATGATGTTCAGCTCGAGAGATCGGTGCTTATAGATCTTGCATTGGCTGCTATGGATGAATTATTAAAGTTGGCTCAGACAGATAATCCTATTTGGATTAAGGGATTGGATGGAGAAAGGGACATATTGAATCATGAAGAGTATGCAAGGTTGTTTTCTTCTTGTATTGGTCCAAAACCCACTGGTTTTGTCTCTGAAGCTACAAGAGAAACTGGCATAGTAATAATCAACAGTTTAGCCCTGATGGAAACTTTGATGGATGCGAATCGATACGCAGATATGTTTCAGTCGATGATAGCTAGATCGGTCAATCTTGATGTTTTATCGGGTGGCATCGGTGGAACAAGAAATGGTGCTATACATTTGATGCATGCCGAAGTTCAATTGCTTTCACCACTAGTCCCGGTTCGTCAAGTGAAAATCCTTCGGTTCTGTAAGCAACATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTGTTGAGATCGGTCACGATGCTGCTAATGCTCAACCTTTCATTAGCTGTAGAAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCAAATGGTTACTCCAAGATTGTCCACTACTACTCCTAG 765 0.4301 MALPTSNSGLELGIGRNGFGGGSSSHGTSLPMGLDLGDGPAMHGIRSPMGLMGNSNDVQLERSVLIDLALAAMDELLKLAQTDNPIWIKGLDGERDILNHEEYARLFSSCIGPKPTGFVSEATRETGIVIINSLALMETLMDANRYADMFQSMIARSVNLDVLSGGIGGTRNGAIHLMHAEVQLLSPLVPVRQVKILRFCKQHAEGVWAVVDVSVEIGHDAANAQPFISCRRLPSGCIVQDMPNGYSKIVHYYS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28242g00001 254 SUPERFAMILY Bet v1-like 60 253 - -
Trme28242g00001 254 ProSiteProfiles START domain profile. 58 254 IPR002913 GO:0008289
Trme28242g00001 254 Pfam START domain 68 253 IPR002913 GO:0008289
Trme28242g00001 254 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 52 250 IPR042160 -
Trme28242g00001 254 CDD START_ArGLABRA2_like 62 250 - -
Trme28242g00001 254 SMART START_1 67 254 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28242g00001 Trme-Chr28242 2 1167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28242g00001 61 250 Homeobox Transcription Factor Family AT3G61150 63.158 3.33e-81 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28242g00001 K09338 - gmx:100794400 381.333