Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28237g00001 TTGAAATATCATGACACTGGAAGAGATTCAAAAATCTTGCCACAATGTGGTCAGTGGAACATGGCAAACAAGAAAGTTATAAATGGAAGCAAAGTAAGATATTGGGCATGTATCAATTTCTCAAGAAATGTCCAACAAAGAACAGCTAATGCATTTTGCCAACAGTTAGTTCAGGCGTGCCAAACTTTAGGCATGGAATTTAGTCAGGAACCTGTGATTCCTGTATATTCAGCAAGACCAGATATGGTTAAGAAGGCCTTGAAGTATGTACACTCTACTTCTCTAAACAAACTTGATGGGAAAGAGCTAGAGTTTCTCATCGCGATTCTTCCGGACAACAATGGCTCTCTCTATGGTATGATTCTAAGATATTCTAGTACTTTATACGTACTTCATTTTCAGCTTCGTTTGTTTCACTGCCTATGA 426 0.3803 MKYHDTGRDSKILPQCGQWNMANKKVINGSKVRYWACINFSRNVQQRTANAFCQQLVQACQTLGMEFSQEPVIPVYSARPDMVKKALKYVHSTSLNKLDGKELEFLIAILPDNNGSLYGMILRYSSTLYVLHFQLRLFHCL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28237g00001 141 SUPERFAMILY Ribonuclease H-like 12 125 IPR012337 -
Trme28237g00001 141 Gene3D - 1 137 - -
Trme28237g00001 141 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 128 - -
Trme28237g00001 141 Pfam Mid domain of argonaute 14 91 IPR032473 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme28237g00001 Trme-Chr28237 115 747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28237g00001 1 127 Eukaryotic Initiation Factors Gene Family AT5G43810 62.205 7.81e-53 177