Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme28229g00001 ATGGAGTTGGAGCAGTATATTAATAGTTCTGGTAATTTAGATGCTGTTAATTCGGTTACTTTGAAAGATGGAACGAAAATTAGGGCACCGNATTCGTCTAGGATTGCTTATGAGGATGAACCGAAACTGATGCTGTTGCAGGAGTGGAATTTGTTTGATTCGATGCTTTGTAGTTCGTACATTGCAACGAAATTGAAGACGTGGAGTGATAATGGGATGAAGAAATTGAAGCTTTTGTTGGCTAGAATGGGGTTTGCACTTTCTGATTGTCAACAGAAGTTTCAGTATATGAATGTTGAGGTGAAACGGAAGATGAAACGCGAGTTTGAGAAGTTTTTGCCGGAATATGGACTTACTGATTTTTATTATCGCGGGTTTTTGAGGATTCATGGTTATAGTTCAAAAGTTTCTGCTGCTGATGTTGTTTATGGTGTTACTGCGCTTTTAGAATCGTTTGTGAACTCGGACGGTTCTTGTGCTTCGATGCAGTTTAATGTGGCGTTTGATGCACTTTCTTTGAACAATGTTGATAAACTTAAAGCTGGGATGCAACAAGCTATTAAGGTTCAGAGAGCAATTTTGAGGCAGGGAAGTGTTGCGATTACGAAAAATGGTTACATTCGAAGTGGAAGGAAGTTTCGGTGGGTAAAACTTGAGGATTCTGCAGAGTCGAGATTGTTAGGGTATCCTCAAGCTTTGACAAAGTTTTGTTATTTTCTAATGGATGCTTTGAGAGAAAAGGGTGCAAGGATGAAGCCTTTGATTTGTGCTTGTATGTCTCAGGAACCAAATAAAGTTCTTGTTGTTGGGGTCTGTGGGAGGCCGCGTTTGGCTGCTGCTCAAGGAAATGCATTTGGGGTTGCGTTTAGAAGTGCGGCTGAAGACGTTGACAGTGAGTTTTTCCATGAGTTGTTTGAGTCTTCTTGGATTGTGTTAGAATCTAAATCAGTTAATTCTTTCATGGTTAAGTTGACTGAGAAACTTTGA 987 0.3992 MELEQYINSSGNLDAVNSVTLKDGTKIRAPXSSRIAYEDEPKLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALSDCQQKFQYMNVEVKRKMKREFEKFLPEYGLTDFYYRGFLRIHGYSSKVSAADVVYGVTALLESFVNSDGSCASMQFNVAFDALSLNNVDKLKAGMQQAIKVQRAILRQGSVAITKNGYIRSGRKFRWVKLEDSAESRLLGYPQALTKFCYFLMDALREKGARMKPLICACMSQEPNKVLVVGVCGRPRLAAAQGNAFGVAFRSAAEDVDSEFFHELFESSWIVLESKSVNSFMVKLTEKL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme28229g00001 328 PANTHER CDC45-RELATED PROTEIN 1 327 IPR003874 GO:0006270
Trme28229g00001 328 Pfam CDC45-like protein 19 151 IPR003874 GO:0006270
Trme28229g00001 328 Pfam CDC45-like protein 157 327 IPR003874 GO:0006270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme28229g00001 1 328 Core DNA Replication Machinery Family AT3G25100 78.049 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme28229g00001 K06628 - egr:104456527 580.482