Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme281g00001 ATGCAATACCCTCCTAGTAGCACAACCTATCGGATATTCATCGGGCTTTCCTTTCTTCGTCTTATCTACGCTACAAGAATCAGTGATTGGTTAACCGAGCTTGAGGAGAATGAAAATATAAACTTTGTTATGGTTCGCTTGGTAAAGATGGTCTTGGTTTGCTTGTTTATTTGCCATTATGGTGGGTGCATGTTCTATTTTATAGCCACATTACATGCAAATCCTAAGGGCACTTGGTTTTTTCTAGCCGATACAAATTTCCTAGAGTTGGGGTTAATCCAAAGATACTCAACTTCTATGTATTGGGCTGTGACCTCTTTCAGCACCGTTGGATTTGGTGACTTGCATGCTGTTACATTACCGGAGAGGATCTTTTCCATATTTTTTTTGTTCCATAACGTTGGAGTAACCGCATATGTGGCCACAAGTATCGGTAATTTAGTTGCCCCTGATATTGGTCCAACGGGAAGATACAGAGCACGTCGGCGTCGTGTGTTAAGTTTCTGTCGACGACATAATTTACCTATTCAACTTCGAGATGAGGTGTCTGCTCATTTKAAGTTAGAGTATCTATCAAATTTAGAACCATCAGAGGATCATG 601 0.406 MQYPPSSTTYRIFIGLSFLRLIYATRISDWLTELEENENINFVMVRLVKMVLVCLFICHYGGCMFYFIATLHANPKGTWFFLADTNFLELGLIQRYSTSMYWAVTSFSTVGFGDLHAVTLPERIFSIFFLFHNVGVTAYVATSIGNLVAPDIGPTGRYRARRRRVLSFCRRHNLPIQLRDEVSAHXKLEYLSNLEPSEDH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme281g00001 200 SUPERFAMILY Voltage-gated potassium channels 19 185 - -
Trme281g00001 200 PANTHER POTASSIUM CHANNEL AKT1 16 192 IPR045319 GO:0005249|GO:0006813
Trme281g00001 200 Pfam Ion transport protein 12 145 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Trme281g00001 200 Gene3D - 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme281g00001 Trme-Chr281 569 1600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme281g00001 6 195 Ion Channels AT2G26650 39.474 1.49e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme281g00001 K21867 - mof:131152358 147.902