Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme281700g00001 | ATGAAGAACTACACAATCTATGCTGTTTCCATCACTATCCGTATAGTTTTTGGGTTCATGCTTGTTGCTCTAATCTGGAAGTTTGACTTCTCTCCTTTCATGGTTTTGATCATCGCTGTCTTGAATGACGGAACCATCATGACCATCTCTAAGGATAGGGTGAAGCCATCTCCTGTTCCCGACTCATGGAAGCTCAACGAAATCTTTGCCACCGGAGTCGTTCTTGGAACATATATGGCCATCATGACTGCAGTTTTTTTCTATCTCGTTCATGAAACCAATTTCTTCTCA | 291 | 0.4192 | MKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAVLNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAIMTAVFFYLVHETNFFS | 97 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme281700g00001 | 97 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 1 | 96 | IPR023298 | - | |
| Trme281700g00001 | 97 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 94 | - | - | |
| Trme281700g00001 | 97 | Gene3D | - | 1 | 97 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme281700g00001 | Trme-Chr281700 | 30 | 320 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme281700g00001 | 1 | 97 | Primary Pumps ATPases | AT2G07560 | 87.629 | 2.35e-56 | 184 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme281700g00001 | K01535 | - | gmx:102668626 | 184.111 |