Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2814g00001 AACATGGGAATATATGATGATGGAGGTGAAGAGGAAATGACAATTGCCGAGTCGTTGCAATTTAACTTTGATAGTATACGAGTTGCTACCAGTAATTTCTCTGATTGTAATAAACTTGGACAAGATCCAACAAGGAAAACACAATTGAATTGGGAAAAGCGCTACAATATAATAAAAGGTATTGCCCGAGGTATTCTTTATCTTCACGAGGATTCTCGCTTGCGAATTATACACCGTGATCTCAAAGCAAGCAATATTCTATTGGACAACGAGATGAACCCTAAGATATCTGATTTTGGATTGGCCAGACTGTTTGTTATCGGTCAAACTCAAGGAAGCACAAATAGGATCGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGAGAATTTTCGGTGAAATCGGATGTCTATAGTTTTGGAGTATTAGTTTTGGAGATTATAAGTGGTCATAAAAATGGTGCAAACTTTTGTCATGGGGAGGATATGGAGTATCTATTGAGCTATGCATGGAGAAGCTGGATAGAGGGGAGAGCTACTGATATTATAGACCCATTATTAAACAACATTTCACAAGATGAAATAATGAGATGCATCCATATTGGTTTACTATGCATTCAAGAAAACTTAATAGACAGACCAACCATGTCTTCTGTTGCACTCATGCTTAGTAGTTATTCTCTTGCTCTCTCAATGCCTTCGAAACCTGCGTATTTTATAGGAAGTGGAACTAGAAGACTACCAGACATGCAGCAACAAGTTGATAATGTAGGTGCAACAAGATCAGATGAATCGATGAACCAAATTTCAATTACTGATCCATACCCACGATAG 843 0.3796 NMGIYDDGGEEEMTIAESLQFNFDSIRVATSNFSDCNKLGQDPTRKTQLNWEKRYNIIKGIARGILYLHEDSRLRIIHRDLKASNILLDNEMNPKISDFGLARLFVIGQTQGSTNRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLVLEIISGHKNGANFCHGEDMEYLLSYAWRSWIEGRATDIIDPLLNNISQDEIMRCIHIGLLCIQENLIDRPTMSSVALMLSSYSLALSMPSKPAYFIGSGTRRLPDMQQQVDNVGATRSDESMNQISITDPYPR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2814g00001 280 ProSiteProfiles Protein kinase domain profile. 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme2814g00001 280 SMART serkin_6 5 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme2814g00001 280 FunFam cysteine-rich receptor-like protein kinase 10 34 233 - -
Trme2814g00001 280 Pfam Protein kinase domain 44 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme2814g00001 280 MobiDBLite consensus disorder prediction 260 280 - -
Trme2814g00001 280 Gene3D Transferase(Phosphotransferase) domain 1 38 235 - -
Trme2814g00001 280 SUPERFAMILY Protein kinase-like (PK-like) 46 226 IPR011009 -
Trme2814g00001 280 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 49 256 - -
Trme2814g00001 280 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2814g00001 Trme-Chr2814 352 2241 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2814g00001 42 272 Receptor kinase-like Gene Family AT4G23150 58.051 6.85e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme2814g00001 Pkinase 8.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2814g00001 - - mtr:11442310 426.787