Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2809g00001 TGGAGTGCATTTGCTTGGTTGGCTGGAATGACTGTGTTCATTGCTTTGTTGTCTGAATATGTGGTGGATACAATTGAGGATGCATCAGATTCATGGGGTTTGTCTGTCAGTTTCATAAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATTTTTGCTTTCAAGAACAAGCTGGACATTTCCTTAGGTGTTGCATTGGGCTCTGCTACTCAAATTGCAATGTTTGTGGTTCCACTCTGTGTGAATGTTGCTTGGATAATGGGTGTGAAAATGGACTTGAACTTCAACCTCCTTGAGACAGGTTCTCTTGCTTTGGCAATTATTGTCACTGCCTTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCCTTATTCTCCTACTTTGCTACTTTGTTATTGGTGCTTGTTTCTTTGTGCAAAGAACACCCATTAACCAAAATGATGTTCCTAACTTGACTCTTAAATCAGTCACTGATTCAGTTTTAAGCACCTAA 519 0.4046 WSAFAWLAGMTVFIALLSEYVVDTIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVNVAWIMGVKMDLNFNLLETGSLALAIIVTAFTLQDGTSHYMKGLILLLCYFVIGACFFVQRTPINQNDVPNLTLKSVTDSVLST 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2809g00001 172 FunFam Vacuolar cation/proton exchanger 1 147 - -
Trme2809g00001 172 Pfam Sodium/calcium exchanger protein 3 141 IPR004837 GO:0016020|GO:0055085
Trme2809g00001 172 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 151 IPR004713 GO:0006812|GO:0008324|GO:0016020
Trme2809g00001 172 Gene3D - 1 148 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2809g00001 Trme-Chr2809 2 1626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2809g00001 1 154 Antiporters AT2G38170 77.922 1.29e-82 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2809g00001 K07300 - gmx:100816231 298.901