Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme280855g00001 ATGGGTGATCCTGGTGTTGCCAAGAGTCAGCTTCTTAAACACATAATCAATGTAGCACCCAGGGGTGTATACACCACTGGCAAAGGAAGTAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCGGTGACAAATGAGATGGTTTTGGAGGGTGGAGCATTG 165 0.4727 MGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTNEMVLEGGAL 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme280855g00001 55 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 55 IPR031327 GO:0003677|GO:0005524|GO:0032508
Trme280855g00001 55 Pfam MCM P-loop domain 1 55 IPR001208 GO:0003677|GO:0005524|GO:0032508
Trme280855g00001 55 Gene3D - 1 55 IPR027417 -
Trme280855g00001 55 ProSiteProfiles MCM family domain profile. 1 55 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme280855g00001 1 55 Core DNA Replication Machinery Family AT4G02060 94.545 9.29e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme280855g00001 K02210 - rcu:8267347 111.309