Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme279973g00001 TCTGTCTTTCAGATTGGCAGGGCTGGTTTAGCTTTGACAGAAGAACAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCCATTCTCCTGCTCGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCCCTGGATCTCCTTATGCTGGGGCGCTCGACAATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCAGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCACGATGAATTATTGACCCTGGGTGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCTACAAAACTTCCAAAGAGGTCTAA 359 0.4345 SVFQIGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLGGLYAELLRCEEATKLPKRS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme279973g00001 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 108 IPR027417 -
Trme279973g00001 119 Gene3D - 4 111 IPR027417 -
Trme279973g00001 119 PANTHER ABC TRANSPORTER B FAMILY 4 110 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme279973g00001 Trme-Chr279973 1 359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme279973g00001 5 113 Calmodulin-binding Proteins AT2G36910 45.045 2.38e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme279973g00001 K05658 - gmx:100799399 209.92