Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2795g00001 ATGATAGATGTAGATAGATCAAAAGAATTCCAGAAGAAACACAATGGACTTGATTCTCGTTTTGAAGTGGTGAAACCACTTCTGAATCTTGAGTCTCGGGATACTGTTTTAATTTTGGAAATTTATGGAGAGAGTGGAATAGGCAAAACCACACTTGCCTTGGATATCTATAACAAGATCAAACATCAATTTGAAGCTGCGAGTTTTCTTGATAATGTAAGAGAAGCATCAGACAGGTGGTTTCAAGGTATAGAAATTCTCCAAATGACACTTCTGTCTAAGATGGGTGAGGAAACCGATAGTATGTATACAGCAGGAAGGGAAATCAAGCACAGGCTACGCGATAAAAGAGTTCTTCTAGTTCTAGATAGCGTTTATTCAATAAAGCAATTAGAAGCGCTAGCCGGAGGATCTGATTGGTTTGGTTCTGGTAGCAGGATTATCATAACAACAAGAGACAAATCATTGGTAGATAACTATGCGATGAATGGTTTTATCATTGAAAAATATAAAATTGAAGAGATGAATATTCAAGACTCTATGGAACTCTTTTGTTGGAATGCCTTCGATACAATTAATCCTGCAAAAAACTTCGAAGATCTTACTACTCTTGCTGTGAGTTATGCAAAGGGTGTTCCATTTGTTTTGGTACGACTAGGCTACATTTTGAAGGGTATGACCCCAAATGATTGGGAAATGATATTGGAGAAACTTAATAAGGGAATTCGAAATGCTGAGATTCAACCTGTACTTGCAAGCAGCTATGATAGTTTGCTTCATTCAGACCAGCAAATTTTCTTAGACATTGCTTGTTTCTTTAAAGGGGAGAAATGGGAGTATGTTAAAAGGGTAATAATGCCTTATATCTCCTTTGGTATTCGAGCATTAGTTATGAAATATCTCATAAATATTGATGAAAATGGCTGCTTAGATATGCATGATATAATACAAGACATGGCCAAACAGGTTATCATAAATGAGTCTCCAAATATTAATGGACGTAGTAGATTATGGGATTTTAACGAGGTTCTTCACGTATTACGTTGGAACGAGGATAACTGGAAAATTCAAGGAATAATACTAGACCCCCCTTCTCATAAAAAAATTTACTCCCTCCGGTCTTATGCTTTCGAGAAAATGGAGAACCTTAGAATTCTGATTGTTCGGAATACAACATTTTCAACAGCTCCTCACTATTTACCAAATAGTTTACGGTTACTTGATTGGAAGGGGTACCCATCAGAATCTTTTCCAAATGAATTTTATCCTAGTAAAATTGTTGATTTCAATTTACTTCACAGTTCTCTGAGTTTGAAAAACCGATTTAAGATGTTTCTGGATTTGACATTCATCAATCTCTCTGAGTGTCAATCTATTACTCGAATACCTGATGTGTCTGGATCCATAAATTTAAGAGTGTTGACACTTGACAGATGCCGTAAATTGGTAACATTTCCTGATTCCATTGGATTTATGCCAAAATTGGCGTGTTTAAGTGCTTCAAAGTGTACCAAGCTAGAAAGTTTTGTCCCAAAAATAGACTTGCCATCTCTTGAGGTTCTCTCCTTTAATTTGTGCAAAAGACTTGAACACTTCCCTGATGTAACGAGAAAGATGGATAAGCCATTAAGGATTAGCATGATAGGTACTGCTGTTAAGAGGCTTCCTAATTCCGTTGGTAATCTTACGGGGCTTGAATACATAGACATGTCATTTTGCAGAAGACTTGATGATCTATCCAGTACCTTCTTCTTATTGCCAAAACTTGCCACGTTAAGAATTGATGGATGTTCTCAACTTAGAAAATCATTTATAAG 1817 0.3621 MIDVDRSKEFQKKHNGLDSRFEVVKPLLNLESRDTVLILEIYGESGIGKTTLALDIYNKIKHQFEAASFLDNVREASDRWFQGIEILQMTLLSKMGEETDSMYTAGREIKHRLRDKRVLLVLDSVYSIKQLEALAGGSDWFGSGSRIIITTRDKSLVDNYAMNGFIIEKYKIEEMNIQDSMELFCWNAFDTINPAKNFEDLTTLAVSYAKGVPFVLVRLGYILKGMTPNDWEMILEKLNKGIRNAEIQPVLASSYDSLLHSDQQIFLDIACFFKGEKWEYVKRVIMPYISFGIRALVMKYLINIDENGCLDMHDIIQDMAKQVIINESPNINGRSRLWDFNEVLHVLRWNEDNWKIQGIILDPPSHKKIYSLRSYAFEKMENLRILIVRNTTFSTAPHYLPNSLRLLDWKGYPSESFPNEFYPSKIVDFNLLHSSLSLKNRFKMFLDLTFINLSECQSITRIPDVSGSINLRVLTLDRCRKLVTFPDSIGFMPKLACLSASKCTKLESFVPKIDLPSLEVLSFNLCKRLEHFPDVTRKMDKPLRISMIGTAVKRLPNSVGNLTGLEYIDMSFCRRLDDLSSTFFLLPKLATLRIDGCSQLRKSFI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2795g00001 605 Gene3D - 6 165 IPR027417 -
Trme2795g00001 605 PRINTS Disease resistance protein signature 112 126 - -
Trme2795g00001 605 PRINTS Disease resistance protein signature 209 223 - -
Trme2795g00001 605 PRINTS Disease resistance protein signature 560 576 - -
Trme2795g00001 605 PRINTS Disease resistance protein signature 38 53 - -
Trme2795g00001 605 Gene3D Ribonuclease Inhibitor 546 604 IPR032675 -
Trme2795g00001 605 Gene3D Ribonuclease Inhibitor 364 545 IPR032675 -
Trme2795g00001 605 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 582 IPR044974 GO:0006952
Trme2795g00001 605 Pfam NB-ARC domain 32 258 IPR002182 GO:0043531
Trme2795g00001 605 SUPERFAMILY "Winged helix" DNA-binding domain 246 347 IPR036390 -
Trme2795g00001 605 Gene3D - 175 259 IPR042197 -
Trme2795g00001 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 269 IPR027417 -
Trme2795g00001 605 SUPERFAMILY L domain-like 365 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2795g00001 Trme-Chr2795 61 2317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2795g00001 16 601 WRKY Transcription Factor Family AT5G45050 30.144 9.99e-64 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2795g00001 - - tpra:123920924 778.089