Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27948g00001 ATTGATACAACAGTGTCCTTTACTCCTAATATAAAAAAGATCCAAGATGATATTGCTGGACCATTAGGGTTGAAATGGGAGGATTGTACTGAATCAGACCGACCGACAAAACTATGGAGCAGGTTAACAAATGGTGAGAAAATTCTTCTGATAATAGATGATGTGTGGGAACAAGAGGCACCTTTTGATTTTGATGCAATAGGAATTCCAAAACGGGACAATCGCAATGGCTGTAGAGTTCTTGTAACCTCACGTAGTAAACAAGTACTCATCAAAATGGATTGTGATAAGATCATAGAATTGGATCTTTTAACCGAAGACGAATCGTGGAACATGTTTGAAAGATGTGCTGGTATATCAAACAGTTCTCCAAATGATTTGATTGGTTGCGGACGTTTAATTGTAAAGGAGTGCAAGCAATTACCAGTTGCAATTGCAATTATTGCCAGCAATTTAAAGGGGCAACATCAAGTGCATGAGTGGAAGGTTACACTACAATCATTTAGGAAGATTGGATATATGCATGGTGTTGATGATGATTTGGTTGGAATTTATAAATCTTTGCGGGTTAGCTATGACTATATGAAGGATGAAAAGGCCAAGGGATTGTTCCTCATATGTTCTCTATTTCCAGAAGATGAAGAAATTGATATTTTATTTCTAGCAAGACTTTGCATAGGAGCAGGAGTTTTTGAAGTAGATTATGGCAGCTACGATGATGCTAGAAACCAAGTATTCGTAGCTAAAAACATACTCGTAAATGCTTGCTTGTTGTTGCAAGGCGATGAAGACCGTGTAAAAATGCATGATTTGGTTCGTGATGTTGCTCAACAGATAGCGAACAGAGAGATTCAATGTGTATTGATGGACTACTTCTATCACTACCACACTCGATTCAGTCGTTGA 906 0.3786 IDTTVSFTPNIKKIQDDIAGPLGLKWEDCTESDRPTKLWSRLTNGEKILLIIDDVWEQEAPFDFDAIGIPKRDNRNGCRVLVTSRSKQVLIKMDCDKIIELDLLTEDESWNMFERCAGISNSSPNDLIGCGRLIVKECKQLPVAIAIIASNLKGQHQVHEWKVTLQSFRKIGYMHGVDDDLVGIYKSLRVSYDYMKDEKAKGLFLICSLFPEDEEIDILFLARLCIGAGVFEVDYGSYDDARNQVFVAKNILVNACLLLQGDEDRVKMHDLVRDVAQQIANREIQCVLMDYFYHYHTRFSR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27948g00001 301 Gene3D - 103 196 IPR042197 -
Trme27948g00001 301 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 2 285 - -
Trme27948g00001 301 Gene3D - 2 102 IPR027417 -
Trme27948g00001 301 Pfam NB-ARC domain 4 193 IPR002182 GO:0043531
Trme27948g00001 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 207 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27948g00001 Trme-Chr27948 2 1145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27948g00001 44 285 WRKY Transcription Factor Family AT5G45050 25.703 1.33e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27948g00001 - - tpra:123916351 454.521