Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27910g00001 ATGGAATTGAAGAGGAACAAGAATTGTTCTGATGGTTATGCATGGACTGACTACCTCTCACTACAATTTACTCAAAATGTAATCAGTGAAACTCTTAGAATGGCAAATATTGTCAATGCTATTTGGAGAAAAGCTATCAAAGATGTAGATATTAAAGGGTACCTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACATCTGTTCATTTAGATGGCATGAACTATGAAAAACCATTTGAGTTTGATCCATGGAGATGGGAGGTAAGTAATCAAGCATCAAGTTTTGTGTAG 294 0.3571 MELKRNKNCSDGYAWTDYLSLQFTQNVISETLRMANIVNAIWRKAIKDVDIKGYLIPKDWCVVASLTSVHLDGMNYEKPFEFDPWRWEVSNQASSFV 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27910g00001 97 PANTHER CYTOCHROME P450 26 2 94 - -
Trme27910g00001 97 Gene3D Cytochrome P450 2 97 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27910g00001 97 SUPERFAMILY Cytochrome P450 10 92 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27910g00001 97 PRINTS B-class P450 signature 71 86 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27910g00001 97 PRINTS B-class P450 signature 26 37 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27910g00001 97 PRINTS B-class P450 signature 43 70 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27910g00001 97 Pfam Cytochrome P450 13 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27910g00001 1 95 Cytochrome P450 AT3G13730 54.167 2.21e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27910g00001 K12637 - gmx:100812489 166.007