Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27862g00001 TGGGTAGGAACTGGATTCAAAGAGGAAGTGCTTGAAGAACGTTCTACTAGCCTTCGCTCTAAAGTGATTCCCAAACCAAAGTCATATTATCAATATGGGGAATCAACCAATCCTGATGTATGGTTTGAAGCTAGTGAGGTGTGGGAGGTGAAAGCTGCAGATCTGACCATTAGCCCTGTTTACCGAGCTGCAGTGGGCAAAGTAGATTCCAATAAGGGCATATCTCTTCGATTTCCGCGTCTAGTTCGAGTTCGGCCTGACAAAGCTCCTGAACAGGCCTCTTCGTCTGAGCAGGTTGCTGAAATGTATACTGCTCAAAAACACAATCACAATGACAAACAGGATGACGATGAAGATGATTAA 363 0.4463 WVGTGFKEEVLEERSTSLRSKVIPKPKSYYQYGESTNPDVWFEASEVWEVKAADLTISPVYRAAVGKVDSNKGISLRFPRLVRVRPDKAPEQASSSEQVAEMYTAQKHNHNDKQDDDEDD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27862g00001 120 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 2 119 - -
Trme27862g00001 120 MobiDBLite consensus disorder prediction 86 120 - -
Trme27862g00001 120 Gene3D - 1 107 IPR012340 -
Trme27862g00001 120 Pfam ATP dependent DNA ligase C terminal region 2 88 IPR012309 GO:0003910|GO:0006281|GO:0006310
Trme27862g00001 120 MobiDBLite consensus disorder prediction 91 105 - -
Trme27862g00001 120 SUPERFAMILY Nucleic acid-binding proteins 2 106 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27862g00001 2 120 Core DNA Replication Machinery Family AT1G08130 67.227 1.20e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27862g00001 K10747 - gmx:100783155 184.111