Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27847g00001 CAAGTTGGTGGTAGGAGTGCTAAGGTAAATTTTCCAGAAGTGCCAAAAGGAGGTGAAAGGNNNNNNNNNNANNAAAAAAATAGAGATGACTATAAAGGTTTTGTAGACAGCCCTCACAAGATCTATGCTGGAAACCTTGGTTGGGGACTGAACTCTCAGGATCTTAGAGATGCCTTTGCTGAACAGCCAGGCATATTGGGTGCCAAAGTCATCTATGAGAAGGACAATGGAAGATCTCGAGGTTTCGGATTTGTCACTTTTGAAACTGCAGAGGATTCACAGGCTGCTTTGAGCGCTATGAACGGTGTGGTAAGAACTATTTTGGCAGATTAG 333 0.4204 QVGGRSAKVNFPEVPKGGERXXXXXKNRDDYKGFVDSPHKIYAGNLGWGLNSQDLRDAFAEQPGILGAKVIYEKDNGRSRGFGFVTFETAEDSQAALSAMNGVVRTILAD 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27847g00001 110 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 110 IPR000504 GO:0003723
Trme27847g00001 110 SUPERFAMILY RNA-binding domain, RBD 35 103 IPR035979 GO:0003676
Trme27847g00001 110 PANTHER OS02G0815200 PROTEIN 1 103 - -
Trme27847g00001 110 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 102 IPR000504 GO:0003723
Trme27847g00001 110 MobiDBLite consensus disorder prediction 1 30 - -
Trme27847g00001 110 Gene3D - 13 107 IPR012677 -
Trme27847g00001 110 SMART rrm1_1 40 110 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27847g00001 Trme-Chr27847 724 1056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27847g00001 41 102 Eukaryotic Initiation Factors Gene Family AT4G34110 38.710 1.07e-08 49.7