Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27819g00001 ATGATCTTGACAATGATTATGGGAATTTGGCATTATGTGCACAAAGAAAGATACATGTTTGAACTCAAGAACAAAGTTTCAACTGAGTATTTGAAGGAATTAGCCAACAACACTGATGTTCATAGAGTGCCTGGAATTGGACTTTTATATTCTGAGCTTGTACAAGGAATTCCGCCGATATTTCCACATTTTATAGCTAGTGTACCATCTATTCATTCGGTTGTCGTATTTGTTTCCATTAAGACGATTCCGGTTAGTAGAGTTGCATTGGAAGAAAGGTTTTTGTTTCGACAAGTTGAACCGAGGGAGTATAGAATATTTCGATGTGTTGCGAGGTTTGGATACAGTGATGTACTTGAGGATCCTTTAGAGTTTGAGTCACAATTAATGCAAAATCTCAAAGGATTCATTCAACAAGAGAATTTCATGCTTGAGGCTAATGATGGTACTAATACTAACAAT 462 0.3615 MILTMIMGIWHYVHKERYMFELKNKVSTEYLKELANNTDVHRVPGIGLLYSELVQGIPPIFPHFIASVPSIHSVVVFVSIKTIPVSRVALEERFLFRQVEPREYRIFRCVARFGYSDVLEDPLEFESQLMQNLKGFIQQENFMLEANDGTNTNN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27819g00001 154 Pfam K+ potassium transporter 1 117 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme27819g00001 154 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 144 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27819g00001 Trme-Chr27819 8 469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27819g00001 1 143 Inorganic Solute Cotransporters AT4G13420 50.350 1.98e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27819g00001 K03549 - gmx:100814313 247.284