Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme277874g00001 ATGCACGAATATCGTCTTGCTAATGTTGATCGATCCGCTGGCAAGAAAAACAACTTAAGGCTTGATGATTGGGTGTTATGTAGAATCTACAACAAGAAAGGAAAGATTGAGAAATTCAACACTAACAACACACCAAAGGTTCAAAATTACTATGAGCATGAAGAAGAACAAGAACATGAGATGAAGCCAGAAATTAAGAAATTGGGGAACTACCAATTG 219 0.3653 MHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIEKFNTNNTPKVQNYYEHEEEQEHEMKPEIKKLGNYQL 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme277874g00001 73 MobiDBLite consensus disorder prediction 53 73 - -
Trme277874g00001 73 Gene3D NAC domain 1 38 IPR036093 GO:0003677|GO:0006355
Trme277874g00001 73 ProSiteProfiles NAC domain profile. 1 32 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme277874g00001 Trme-Chr277874 1 335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme277874g00001 1 38 NAC Transcription Factor Family AT1G77450 86.842 2.45e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme277874g00001 - - gmx:100779770 103.219