Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme277077g00001 GGTCGTAGATTCAGTGATGCCTCTGTTCAGAGTGATATGAAATTGTGGCCTTTTAAGATTATTTCTGGTCCTGCTGAAAAGCCAATGATTGGTGTTAACTACAAGGGTGAAGATAAGCAATTTGCTGCTGAAGAAATCTCATCTATGGTGCTTATGAAGATGCGGGAGATTGCTGAGGCCTACCTTGGCTCTGCTATTAAGAATGCTGTTGTTACCGTCCCTGCTTACTTTAATGATTCCCAACGTCAAGCAACTAAGGATGCCGGGGTTATTGCTGGTCTTAATGTTATGCGAATTATCAATGAGCCCACTGCTGCAGCCATTGCTTATGGTCTTGACAAGAAGGCAACCAGCGTTGGA 360 0.4389 GRRFSDASVQSDMKLWPFKIISGPAEKPMIGVNYKGEDKQFAAEEISSMVLMKMREIAEAYLGSAIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme277077g00001 120 FunFam Endoplasmic reticulum chaperone BiP 18 119 - -
Trme277077g00001 120 Gene3D - 1 119 - -
Trme277077g00001 120 Pfam Hsp70 protein 1 116 IPR013126 GO:0005524|GO:0140662
Trme277077g00001 120 SUPERFAMILY Actin-like ATPase domain 1 114 IPR043129 -
Trme277077g00001 120 PANTHER HEAT SHOCK PROTEIN 70KDA 1 115 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme277077g00001 Trme-Chr277077 2 361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme277077g00001 1 120 Calmodulin-binding Proteins AT5G02500 90.833 3.48e-73 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme277077g00001 K03283 - gmx:100804917 226.098