Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27700g00001 TCATCTTGTAGAGGGAAAGATAGTCTTGGTGAAGAAGTAATCAAACCATATACTCCAACAACATTGGATACGGATGTTGGATACTTTGAATTGGTTGTTAAGATGTATCCACAAGGAAGAATGTCTCATCACTTTAGTGAGATGCGCGAAGGTGATTACTTAGCTGTGAAAGGACCAAAGGGACGTTTTAAGTACCAACCCAATGAAGTAAAAGCTTTTGGAATGATTGCTGGCGGCACTGGCATCACCCCAATGTTTCAGGTATTGGATAAGTAA 276 0.4022 SSCRGKDSLGEEVIKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFSEMREGDYLAVKGPKGRFKYQPNEVKAFGMIAGGTGITPMFQVLDK 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27700g00001 91 Gene3D - 58 91 IPR039261 -
Trme27700g00001 91 PRINTS Cytochrome B5 reductase signature 74 91 - -
Trme27700g00001 91 PRINTS Cytochrome B5 reductase signature 51 65 - -
Trme27700g00001 91 PRINTS Cytochrome B5 reductase signature 15 22 - -
Trme27700g00001 91 Gene3D Translation factors 2 57 - -
Trme27700g00001 91 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 59 90 IPR039261 -
Trme27700g00001 91 PANTHER NADH-CYTOCHROME B5 REDUCTASE 9 90 IPR001834 GO:0016491
Trme27700g00001 91 Pfam Oxidoreductase FAD-binding domain 10 65 IPR008333 -
Trme27700g00001 91 CDD cyt_b5_reduct_like 10 89 - -
Trme27700g00001 91 SUPERFAMILY Riboflavin synthase domain-like 9 68 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27700g00001 Trme-Chr27700 2 637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27700g00001 2 88 NADPH P450 reductases AT5G17770 82.759 2.68e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27700g00001 K00326 - cave:132164204 176.407