Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27683g00001 ATGGCGACCAACGAGGATCAAAAGCAAACTGAATCTGGAAGACACGCAGAGGTTGGTCACAAAAGTCTTCTACAAAGTGATGCTCTTTTTCAGTATATTCTAGAGACCAGTGTCTTCCCAAGAGAACATGAAGCCATGAAAGAGTTGAGAGAGGTCACAGCAAAACACCCATGGAACATCATGACAACCTCTGCAGATGAAGGACAATTCTTGAGCATGCTCCTTAAACTTATCAATGCCAAGAATACCATGGAAATTGGTGTCTACACTGGTTACTCCCTCCTTGCCACTGCCCTTGCTCTTCCTGAAGATGGAAAG 318 0.4434 MATNEDQKQTESGRHAEVGHKSLLQSDALFQYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALALPEDGK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27683g00001 106 PANTHER O-METHYLTRANSFERASE-RELATED 20 106 - -
Trme27683g00001 106 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 106 IPR029063 -
Trme27683g00001 106 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 106 IPR002935 GO:0008171
Trme27683g00001 106 Gene3D Vaccinia Virus protein VP39 12 106 IPR029063 -
Trme27683g00001 106 Pfam O-methyltransferase 36 106 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27683g00001 Trme-Chr27683 113 608 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27683g00001 5 106 Monolignol Biosynthesis Gene Families AT4G34050 87.255 1.53e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27683g00001 K00588 - ming:122075864 192.2