Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27666g00001 ATGGGTTTGGATTCACTTCCTGATGTTCCAACTGTCTCTCTTGAATCTTCTCAGTTTCATGAGATTGGTCTTCATTCAATGTCTGACTATTGCAATGTAGATTCCACAAACACAGCACTTAAGTCGAACAAGTCTTTTTCGGGTGCCATTGAATCATCAACAATGAATAAATTTCAAAATGAAACTTTGCATCCAAGGTCTGCTAAACCTATTTCAGTTACTTGCAATAAACTTTTGTCTCCTATCAAATGTCATGGTTATATGCAATCTAAGAATGCATCATATACAAAGGGGGAAGATGCTAAGATCATTGAGGTAAGTCCCCGGCCATATACGAGGAACAGAATGTCTTCAGTTGGATCTTTATCTGTTCCCTTGAGAACTCTTGATCTGCAAGAGAAA 402 0.3781 MGLDSLPDVPTVSLESSQFHEIGLHSMSDYCNVDSTNTALKSNKSFSGAIESSTMNKFQNETLHPRSAKPISVTCNKLLSPIKCHGYMQSKNASYTKGEDAKIIEVSPRPYTRNRMSSVGSLSVPLRTLDLQEK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27666g00001 134 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27666g00001 Trme-Chr27666 1 402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27666g00001 55 134 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 53.659 1.95e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27666g00001 - - tpra:123891334 236.498