Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27646g00001 ATGGGATCTCATGGTGGAGCAACAATTCAAGAGCCAAAGACTGGAACTTTGGCTAAGGAAGGATCTTTGTATAATCTCACACTTGATGAGGTTCAAAATCAGCTTGGAAGTTTAGGGAAACCCTTAGGAAGTATGAATCTAGATGAGCTACTCAAGAGTTTATGGACATCTGAAGCTGCTCAAGCTTCTGGATTGGATTCTAGTGCTACTGATGGTTACATGCAGAATGGTCAACTAGCTTCTGGGTCATCTATGAATCCATTAACACTATCTGGTGACCTTAGTAAGAAGACTATTGATGAGGTTTGGAGAGACATGCAACAGAAGAAGAGTAGTAATCAGGATAGGAGAACAGCTACTGCTACACTAGGTGAGATGACTTTGGAAGATTTCTTGATGAAAGCTGGTGTGGCTACTGAATCTTTTCCTTCTGAGGATAATGCTATGTCAGAAAGGGTTGATTCTCAACAACATGATACATCTCAGCATGGTCATTGGATGCAGTACCAAATCCCTTCAGCTCAGCAACAACAACAACAGCATCAGCATCAAAATAATCAGAATAATATGATGACTGGTTTTGCAGGTTATATGGCTGGTCATGTGGTTCAACAGCCTGTTTTGGATGCAGGATACACTGAAGCAATGTTGAGTTTGTCACCGTCTTCTTTAATGGCTACTTCGTCAGATACACAGACTCAAGGTAGGAAAAGGGTTGCCTCTGGTGTTGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCGCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATCAAAGTTTCACATTTGGAAGAAGAGAATGAAAGGCTTAAACGACTACACGGCAATGAGTG 896 0.4219 MGSHGGATIQEPKTGTLAKEGSLYNLTLDEVQNQLGSLGKPLGSMNLDELLKSLWTSEAAQASGLDSSATDGYMQNGQLASGSSMNPLTLSGDLSKKTIDEVWRDMQQKKSSNQDRRTATATLGEMTLEDFLMKAGVATESFPSEDNAMSERVDSQQHDTSQHGHWMQYQIPSAQQQQQQHQHQNNQNNMMTGFAGYMAGHVVQQPVLDAGYTEAMLSLSPSSLMATSSDTQTQGRKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERLKRLHGNE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27646g00001 298 Pfam bZIP transcription factor 251 292 IPR004827 GO:0003700|GO:0006355
Trme27646g00001 298 Coils Coil 274 294 - -
Trme27646g00001 298 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 293 IPR004827 GO:0003700|GO:0006355
Trme27646g00001 298 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 249 297 - -
Trme27646g00001 298 SUPERFAMILY Leucine zipper domain 251 293 IPR046347 GO:0003700|GO:0006355
Trme27646g00001 298 CDD bZIP_plant_BZIP46 251 295 - -
Trme27646g00001 298 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Trme27646g00001 298 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 294 IPR043452 GO:0003700|GO:0045893
Trme27646g00001 298 SMART brlzneu 247 296 IPR004827 GO:0003700|GO:0006355
Trme27646g00001 298 Gene3D - 249 296 - -
Trme27646g00001 298 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27646g00001 Trme-Chr27646 17 1109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27646g00001 9 293 bZIP Transcription Factor Family AT3G56850 53.378 6.15e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme27646g00001 bZIP_1 1.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27646g00001 K14432 - gmx:100783666 359.762