Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27543g00001 ATGACAGTTGGAACTCTTGCACCAAAGGCAGAGAGTAAGAAACCAAGGAAGAAGAAGGAAATTGTTGATGAGAATGCGCCTTTGTTACCTAAGACTCAAGAAACAGATGCTGAGTTCCATGAATTTAATGGAGCTTCATTTTCTGGGGCTGTTTTCAACTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGCTTGCCTGCTTGCGTCAAAAAGTTGGGAATGGTGCCTGGTCTTCTAGCCATAATCCTAACAGCATTATTGACAGAGAAGGCAATTGAGTTCATGATCAGGTTTTCGAGGGCAGGGAATATTTCTTCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATACGGAAAAGCTTCGGTAGAGTTATCTATTGTAATCGGTAACATTGGTATTCTGATTGTTTACATGATCATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATGCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTATTGTTTTCACAACACTCGCTGTGTTTGCACCTTTGGTCAGCCTCAAGCGAATTGGTGAGTGA 591 0.4281 MTVGTLAPKAESKKPRKKKEIVDENAPLLPKTQETDAEFHEFNGASFSGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKAIEFMIRFSRAGNISSYGSLMGDAFGKYGKASVELSIVIGNIGILIVYMIIIGDVISGTTSSGIHHAGILEGWFGVHWWTGRTFVIVFTTLAVFAPLVSLKRIGE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27543g00001 196 Pfam Transmembrane amino acid transporter protein 45 192 IPR013057 -
Trme27543g00001 196 PANTHER AMINO ACID TRANSPORTER 40 195 - -
Trme27543g00001 196 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27543g00001 Trme-Chr27543 34 739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27543g00001 18 194 Amino Acid or Auxin Permease AAAP Family AT5G38820 59.444 1.39e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27543g00001 K14207 - mtr:25495473 306.99