Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27541g00001 ATGAAATCACTCTTTCAAATGCTTCTTTCTCTAAGGCCTCTAACAATTTATTTGTGTTATTTCATAGCCATAATCTTACAACATGTTTCTTCTAAGAGTCTACCAAACAATGAAACAGTTCCAGCAGTTTTTGTATTTGGTGACTCAATAGTTGATCCAGGAAATAACAACTATATCAACACTCTTATCAAATGTAATTTTCCACCATATGGTAGAGATTTTGATGGAGGCATTCCAACTGGCAGGTTTAGCAATGGTTTAGTCCCATCAGACATAATTGCTGAAAAATTTGGAGTCAAGAAAGTTTTACCTGCTTATCTTGATCCTAATATACAACTTCAAGATCTTCTTACTGGTGTAAGCTTTGCATCAGGTGGTGCTGGATATGATCCTCTAACCTCGCAAATAATGTTTGTGAAGTCATTATCAGATCAATTAGACATGTTCAAGGAGTACAAGAAGAAGGTAGAGGAAGCAGTTGGAGAAAAGAAAAGAGAAGAAATAGTATCAAAGAGCATATACATAGTATGCATAGGAAGTGATGACATTGCTAATACTTATGCTCAAACTCCATTTAGGCGTATTCAGTATGATATTCCATCATACACAGATTTCCTGCTTTCTGAAGCCTCAAAGTTCTTGCAG 645 0.355 MKSLFQMLLSLRPLTIYLCYFIAIILQHVSSKSLPNNETVPAVFVFGDSIVDPGNNNYINTLIKCNFPPYGRDFDGGIPTGRFSNGLVPSDIIAEKFGVKKVLPAYLDPNIQLQDLLTGVSFASGGAGYDPLTSQIMFVKSLSDQLDMFKEYKKKVEEAVGEKKREEIVSKSIYIVCIGSDDIANTYAQTPFRRIQYDIPSYTDFLLSEASKFLQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27541g00001 215 Pfam GDSL-like Lipase/Acylhydrolase 43 190 IPR001087 GO:0016788
Trme27541g00001 215 Gene3D SGNH hydrolase 27 212 IPR036514 -
Trme27541g00001 215 PANTHER GDSL ESTERASE/LIPASE EXL3 22 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27541g00001 Trme-Chr27541 82 1108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27541g00001 18 215 Pollen Coat Proteome AT1G75910 41.584 1.48e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27541g00001 - - mtr:11443183 333.954