Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27508g00001 GATATTGCAAATTCTGAACTGCCACCAACTCACCCCATCAGGCTTGGTCTTGCTCTGAACTTCTCAGTGTTCTATTATGAGATTCTTAACTCTCCTGACCGTGCTTGTGGACTTGCAAAACAGGCTTTTGATGAGGCTATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTCCGTGATAATCTCACCCTTTGGACCTCTGACATGCAGGATGATGGTGCAGATGAAATCAAAGAAGCTGCACCTAAAGGGGCCGATGAGCAGTAA 297 0.4512 DIANSELPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKGADEQ 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27508g00001 98 PANTHER 14-3-3 PROTEIN 1 80 IPR000308 -
Trme27508g00001 98 Gene3D - 1 90 IPR036815 -
Trme27508g00001 98 SUPERFAMILY 14-3-3 protein 1 85 IPR036815 -
Trme27508g00001 98 Pfam 14-3-3 protein 1 76 IPR023410 -
Trme27508g00001 98 PRINTS 14-3-3 protein zeta signature 49 78 IPR000308 -
Trme27508g00001 98 PRINTS 14-3-3 protein zeta signature 22 48 IPR000308 -
Trme27508g00001 98 SMART 1433_4 1 89 IPR023410 -
Trme27508g00001 98 ProSitePatterns 14-3-3 proteins signature 2. 58 77 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27508g00001 Trme-Chr27508 6 769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27508g00001 1 98 14-3-3 family AT1G78300 91.919 3.31e-61 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27508g00001 K06630 - gmx:100794129 190.66