Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27441g00001 ATGGGGTTGGATCTTCATATTCTCATATCAACTATCCTTGGTTTCCTCTTGTTCATAGTAATCAAAATTACTTGGAAATCAAAAGCTAAGAAAACAAATTCCAAATTGCCACYAGGACCAAGAAAACTTCCACTCATAGGGAACATCCACCAACTTGGAGCCTTACCTCATCAATCCCTAGCAAAATTAGCACAACAATATGGACCTCTCATGCACATGAAGCTTGGTGAACTTTCTTGCATAGTTGTTTCATCTCAAGAAATGGCTAAAGAGGTGATGAAAACACATGATCTCAACTTTGCAAATAGGCCTCCACTTCTTGCAGCTGAAATAATCACTTATGGATATAAAGGAATGACTTTTTCTCCACATGGATCCTATTGGAGGCAGATGAGGAAGATTTGTACCATGGAGCTATTATCACAAAAGCGCGTTGAGTCTTTTCGATCACAAAGGGAAGAAGAAATAGCAAATCTTGTCAAAGATATAACTTTGAGTGAAGGGTCACCTATAAATATTAGTGAGAAGCTTGATTCATTTGCTTATGGATTAACTTCAAGAACAGCTTTTGGTGCACAAATTGAAGGTAAAGAAAAGTATAGGAAACTTATGAAGGATGTATCAAAGATGGCTGGAGGGTTTTCTCTTGC 650 0.3754 MGLDLHILISTILGFLLFIVIKITWKSKAKKTNSKLPXGPRKLPLIGNIHQLGALPHQSLAKLAQQYGPLMHMKLGELSCIVVSSQEMAKEVMKTHDLNFANRPPLLAAEIITYGYKGMTFSPHGSYWRQMRKICTMELLSQKRVESFRSQREEEIANLVKDITLSEGSPINISEKLDSFAYGLTSRTAFGAQIEGKEKYRKLMKDVSKMAGGFSLA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27441g00001 217 SUPERFAMILY Cytochrome P450 37 212 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27441g00001 217 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 216 - -
Trme27441g00001 217 Pfam Cytochrome P450 37 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27441g00001 217 Gene3D Cytochrome P450 28 217 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27441g00001 217 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27441g00001 217 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27441g00001 Trme-Chr27441 1 650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27441g00001 28 215 Cytochrome P450 AT3G26320 39.691 2.24e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27441g00001 - - gmx:100819247 300.056