Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27410g00001 ATGTATCCACAAGGAAGAATGTCTCATCACTTTAGTGAGATGCGCGAAGGTGATTACTTAGCTGTGAAAGGACCAAAGGGACGTTTTAAGTACCAACCCAATGAAGTAAAAGCTTTTGGAATGATTGCTGGCGGCACTGGCATCACCCCAATGTTTCAGGTTGCAAGAGCTATACTAGAAAATCCACAAGACAAAACCAACGTAAATTTGATATATGCCAATGTCACATATGATGACATTCTTCTAAAG 249 0.4016 MYPQGRMSHHFSEMREGDYLAVKGPKGRFKYQPNEVKAFGMIAGGTGITPMFQVARAILENPQDKTNVNLIYANVTYDDILLK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27410g00001 83 Gene3D - 22 83 IPR039261 -
Trme27410g00001 83 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 83 IPR001834 GO:0016491
Trme27410g00001 83 CDD cyt_b5_reduct_like 1 83 - -
Trme27410g00001 83 PRINTS Cytochrome B5 reductase signature 17 31 - -
Trme27410g00001 83 PRINTS Cytochrome B5 reductase signature 78 83 - -
Trme27410g00001 83 PRINTS Cytochrome B5 reductase signature 40 59 - -
Trme27410g00001 83 Pfam Oxidoreductase FAD-binding domain 1 31 IPR008333 -
Trme27410g00001 83 Pfam Oxidoreductase NAD-binding domain 41 83 IPR001433 GO:0016491
Trme27410g00001 83 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 20 82 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27410g00001 Trme-Chr27410 391 1001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27410g00001 1 83 NADPH P450 reductases AT5G17770 85.542 5.78e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27410g00001 K00326 - csin:114286340 162.54