Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27345g00001 ATAACTGAGAAAAAGAATGAACTAGGCAAGCTGGAATCAATTGATTGTGGAAAACCACTGGAGGAAGCACTCGCGGATCTGGATGATGTTATTGCTTGTTTTGAGTACTATGCTGGGCTTGCTGAAGGATTGGATGCAAAGCAAAAGACTCCTGTAACTCTTCCTATGGACACCTTCAAGAGCCATGTTCTCAAGGAACCTATTGGTGTTGTTGCATTAATTACTCCATGGAACTATCCTCTCTTAATGGCAACATGGAAAGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTGGCATCTGTGACCTGTTTGGAGTTAGGCGAAATATGTAGAGAAGTTGGCCTTCCTCCTGGTGTCTTAAATATTCTCTCTGGATTAGGCCATGAAGCTGGTGCTTCTTTAGCATCTCATCCTGACGTAGATAAGATTGCCTTTACTGGTAGCTCTGCAACTGGGAGCAGGATTATGACAGCTGCGGCGCAGCTAATCAAG 513 0.4483 ITEKKNELGKLESIDCGKPLEEALADLDDVIACFEYYAGLAEGLDAKQKTPVTLPMDTFKSHVLKEPIGVVALITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNILSGLGHEAGASLASHPDVDKIAFTGSSATGSRIMTAAAQLIK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27345g00001 171 PANTHER ALDEHYDE DEHYDROGENASE 1 171 - -
Trme27345g00001 171 Pfam Aldehyde dehydrogenase family 1 171 IPR015590 GO:0016491
Trme27345g00001 171 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 171 IPR016162 GO:0016491
Trme27345g00001 171 SUPERFAMILY ALDH-like 2 168 IPR016161 GO:0016491
Trme27345g00001 171 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27345g00001 Trme-Chr27345 258 1169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27345g00001 1 171 Aldehyde Dehydrogenase Gene Family AT1G74920 77.193 2.32e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27345g00001 K00130 - gmx:100170755 300.056