Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27314g00001 ATGGCTTTAGGATCTAAGAAGAATCTTACTAATGATGAAAAGAAGATTCTTTCTGATCTTGGATCACAGTTGTCTTCGATGAACATACAAAGTGAGAAGGAGGAAGGGAAGATAGGAAAAAGGGAGGATGATATTGATGTGGAGGATGAGGTGGATGATGAGGAGGAAGAGGGTGTTGGTGTTATTGAAGAACGGATTGGTTTGATTCAGGAGAAAATAATGAAATGGGAGGAAGATCRATCGATGATTTGGGATTTGGGACCTGAAGAAACKTCTGAGTATTTGAATGCGGCTAATGATGCGCGCATATTGATCGATAAGTTGGAGAGTATGCATTTGAGTAAAGAGGATCAAGAGTATAAGTTTTTGCAAAGGGCTTATAGTGTTCTTCAGACGGCCATGACACGGCTCGAAGAAGAGTTCAGCAACTTGCTTATCCAGAATAGGCAACCTTTTGAACCGGAGTATGTCTCCTTTCGGTCGAGCGAAGAAGATGCTGTCGATGGGAATTCTTTTGTCTCTTTAGGTGATGAATCATTTGAGGAATCACTTCGAAGGGATAGTGTTAGCCGAGCTGCTGAGGAGCATGTCATCGATTTAGTGCATCCGGCCGTGATTCCTGATCTCAGGTGTATTGCAAACTTGCTTTTCGCTTCAAATTATGCTCAAGAATGTGCACAAGCTTATACCATTGTTAGGAGGGATGCTTTAGACGAGTGTTTGTTCATTCTTGAAATGGAAAGGCTAAGTATTGAAGATGTTTTGAAAATGGAGTGGAGCACTTTGAATTCAAAGATCAAAAGATGGAGTTGGGCTGTGAAAATCTTTGTTAGGGTTTATCTTGCAAGTGAAAGGTGGCTTAGTGACCAAATATTCGGAGAAGGCGAGCCGGTTAGTCAAGTTTCTTTTGTCGATGCATCAAAAGCTTCAATTTTGCAGCTTCTGAATTTCGGTGAAGCTATGTCTATTGGTCCTCACCAACCCGAGAAGTTGTTTCGAATTCTCGACATGTATGAAGTTCTTGCAGACCTAATGCCGGACATCGATGCTTTGTATCCGGATGAGGTTGGTTCCTCGGTTAAATTTGAATGCCATGAG 1098 0.4171 MALGSKKNLTNDEKKILSDLGSQLSSMNIQSEKEEGKIGKREDDIDVEDEVDDEEEEGVGVIEERIGLIQEKIMKWEEDXSMIWDLGPEETSEYLNAANDARILIDKLESMHLSKEDQEYKFLQRAYSVLQTAMTRLEEEFSNLLIQNRQPFEPEYVSFRSSEEDAVDGNSFVSLGDESFEESLRRDSVSRAAEEHVIDLVHPAVIPDLRCIANLLFASNYAQECAQAYTIVRRDALDECLFILEMERLSIEDVLKMEWSTLNSKIKRWSWAVKIFVRVYLASERWLSDQIFGEGEPVSQVSFVDASKASILQLLNFGEAMSIGPHQPEKLFRILDMYEVLADLMPDIDALYPDEVGSSVKFECHE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27314g00001 366 Pfam Exo70 exocyst complex subunit 267 361 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme27314g00001 366 Coils Coil 120 140 - -
Trme27314g00001 366 PANTHER EXOCYST COMPLEX PROTEIN EXO70 61 366 IPR004140 GO:0000145|GO:0006887
Trme27314g00001 366 SUPERFAMILY Cullin repeat-like 79 354 IPR016159 -
Trme27314g00001 366 MobiDBLite consensus disorder prediction 20 49 - -
Trme27314g00001 366 Gene3D Exocyst complex component Exo70 74 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27314g00001 Trme-Chr27314 66 1163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27314g00001 3 366 EXO70 exocyst subunit family AT3G29400 47.139 2.44e-92 288