Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme271772g00001 GAAACACCAAAATCATGGTTCACAACATCATCAGAATCTGCAAGTTTCTCAACACAATCAGAAGAATATTGTTTCTACAACGATGGAGAATCTTTAGAGACATTGGTTGCCGGAGTTAAGTCGGAGAGGTCATCGGAGAGACTGTTTTTCGAAGCAGAAGACACTAGTTCGATCTTGGAAAAGGCGAAAGCGGATAGTTTTCCGTTTAAAGAAAGTGTTGTGTTAGCTATGGAGTCAGAGGATCCTTATGAAGATTTTAAGAGATCAATGGAAGAAATGGTTGAGTCACATGGTGTGAAAGATTGGGAAGGTTTGGAAGAGCTTTTGAGTTG 332 0.4006 ETPKSWFTTSSESASFSTQSEEYCFYNDGESLETLVAGVKSERSSERLFFEAEDTSSILEKAKADSFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVKDWEGLEELLS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme271772g00001 110 ProSiteProfiles OVATE domain profile. 75 110 IPR006458 -
Trme271772g00001 110 Pfam Transcriptional repressor, ovate 79 109 IPR006458 -
Trme271772g00001 110 NCBIfam uncharacterized plant-specific domain TIGR01568 73 109 IPR006458 -
Trme271772g00001 110 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 19 109 IPR038933 GO:0045892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trme271772g00001 Ovate 2.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme271772g00001 - - mtr:25485550 182.956