Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme271758g00001 GTTGGTGGGTCTACTAGGATCCCCAAGGTGCAGTCACTGTTGCAGGGTTTCTTCAACGGAATGAAGCTCTGCAAGAGCATCAACCCAGATGAGGCTGTTGCTTATGGGGCTGCTGTTCAGGCTGCTATCTTGAACCATGAGGAGAACAAGAAGGTTAAGGATCTTGTGTTGGTGGATGTCACTCCCCTTTCACTTGGTGTGGAAACTGCTGGTGATGTCATGACTGTCCTGATTCCAAAGAACACTACCATTCCGGTCAGGAGGGAGCAGATTTTCTCAACCAACTCAGATAACCAGCTTGGTGTGTCCATCAAGGTGTACGAGGGTGAGAGAAGTAGGAGCATGGACAATAACTTGTTGGGT 363 0.4904 VGGSTRIPKVQSLLQGFFNGMKLCKSINPDEAVAYGAAVQAAILNHEENKKVKDLVLVDVTPLSLGVETAGDVMTVLIPKNTTIPVRREQIFSTNSDNQLGVSIKVYEGERSRSMDNNLLG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme271758g00001 121 Pfam Hsp70 protein 1 121 IPR013126 GO:0005524|GO:0140662
Trme271758g00001 121 PRINTS 70kDa heat shock protein signature 54 73 - -
Trme271758g00001 121 PRINTS 70kDa heat shock protein signature 27 47 - -
Trme271758g00001 121 Gene3D - 1 27 - -
Trme271758g00001 121 SUPERFAMILY Actin-like ATPase domain 1 44 IPR043129 -
Trme271758g00001 121 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 43 121 IPR029047 -
Trme271758g00001 121 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 51 121 IPR029047 -
Trme271758g00001 121 PANTHER HEAT SHOCK PROTEIN 70KDA 1 121 IPR013126 GO:0005524|GO:0140662
Trme271758g00001 121 Gene3D - 28 42 - -
Trme271758g00001 121 FunFam heat shock 70 kDa protein-like 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme271758g00001 Trme-Chr271758 3 365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme271758g00001 1 121 Calmodulin-binding Proteins AT3G12580 80.165 1.10e-62 200