Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27166g00001 TCTACTTTAATGAATTTGTTTCAAAGCATGAACTCGCCGTCCCAGCTAAATTGGCCGGCCAATGGCAATGATCCTTGTGGACAATCTTGGACAGGCATCACTTGCTCAGGCAACCGAATCACCGAAATTAAGTTACCTGGTCGTGGAATATCCGGAACTTTGAGTTACAMTCTACAATCCCTGTCAGCTCTGACCAACCTAGATTTGAGTAACAACAATCTCGGTGGCACTATACCGTACTCGTTTCCTCAACAAACATTGCAGCACTTGAATCTTGGTCACAATCAACTCCAACAAGGACTGACTATGAGCTTTCAAAAGCTTACTTCCCTTACTACATTGTGA 345 0.4348 STLMNLFQSMNSPSQLNWPANGNDPCGQSWTGITCSGNRITEIKLPGRGISGTLSYXLQSLSALTNLDLSNNNLGGTIPYSFPQQTLQHLNLGHNQLQQGLTMSFQKLTSLTTL 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27166g00001 114 Pfam Leucine rich repeat N-terminal domain 2 36 IPR013210 -
Trme27166g00001 114 PRINTS Leucine-rich repeat signature 84 97 - -
Trme27166g00001 114 PRINTS Leucine-rich repeat signature 64 77 - -
Trme27166g00001 114 SUPERFAMILY L domain-like 3 114 - -
Trme27166g00001 114 Gene3D Ribonuclease Inhibitor 1 114 IPR032675 -
Trme27166g00001 114 PANTHER OS05G0588300 PROTEIN 3 114 - -
Trme27166g00001 114 Pfam Leucine rich repeat 63 114 IPR001611 GO:0005515
Trme27166g00001 114 FunFam Leucine-rich repeat receptor-like kinase 1 114 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27166g00001 1 114 Strubbelig Receptor Gene Family AT3G14350 47.826 1.95e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27166g00001 - - gmx:100780323 155.606