Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme271490g00001 ATGATGCACCTTATTGCAATGATTTATTTAGGCAACAGTGCCAGCCAAGCAATCGAGCTTCTTATAAAGAAGGGAGTTCCAGAGTCACGGATAATTTTCCTCAATCTAGTCTCTGCTCCTGAGGGAATACATTGTGTATGTAAACGTTTTCGGCAACTGAAAGTTGTCACTTCCGAGATTGAAGAAGGACTAAATGACCAGTTCCGTGTTATTCCTGGGTTAGGGGAATTTGGTGACCG 239 0.4268 MMHLIAMIYLGNSASQAIELLIKKGVPESRIIFLNLVSAPEGIHCVCKRFRQLKVVTSEIEEGLNDQFRVIPGLGEFGDR 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme271490g00001 80 SUPERFAMILY PRTase-like 7 80 IPR029057 -
Trme271490g00001 80 Pfam Uracil phosphoribosyltransferase 6 80 - -
Trme271490g00001 80 Gene3D - 2 80 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme271490g00001 Trme-Chr271490 17 338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme271490g00001 11 80 PRT Gene Family AT3G27190 81.429 6.02e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme271490g00001 K00876 - gmx:100816209 130.568