Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme271365g00001 ATGTTCGTCAAGGAAGTTATGGAGCTCGTGGAACTGACACCACAAAGGGATACGATTGTTGGATTGCCTGGTGCTAATGGACTCTCGACACAACAGCGCAAAAGGTTGACCATTGCAGTTGAGTTAGTGGCTAATCCTTCTATAATATTCATGGACCAGCCAACTTCTGGACTAGATGCAAGATCAATTGCAACTGTTACGAGAGCAATCAGGAATGTAGTGGATAGTGGAAGAACTATTGTTTGTACCATTCATCAACCAAACATTGATCTATTTGAATCTTTTGATGAG 291 0.4158 MFVKEVMELVELTPQRDTIVGLPGANGLSTQQRKRLTIAVELVANPSIIFMDQPTSGLDARSIATVTRAIRNVVDSGRTIVCTIHQPNIDLFESFDE 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme271365g00001 97 Gene3D - 2 96 IPR027417 -
Trme271365g00001 97 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 97 - -
Trme271365g00001 97 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 89 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme271365g00001 Trme-Chr271365 50 340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme271365g00001 9 86 Calmodulin-binding Proteins AT2G36910 34.615 1.31e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme271365g00001 K08711 - vvi:100251419 162.54