Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27130g00001 AGGTGTGTTCTTCTTGGCGTGAGTTGTGGAGCAAATATTGCAAACTATGTAGCTCGAAAAGCTGTAGAAACAGGCAAACTTCTGGACCCTGTCAAGGTGGTTGCACAAATCCTGATGTATCCGTTTTATGTTGGAAGTGTGCCCACACATTCTGAAATAAAGTTGGCAAACTCTTATTTTTATGACAAGGCTATGTGTATGCTGGCATGGAAACTATTCCTACCCGAGAAAGAATTTAGCCTAGACCATCCAGCCGCCAATCCCCTAGTCCCAGGCCACGGCCCTCCTTTAAAGCTGATGCCTCCAACATTAACAGTAGTGGCAGAACATGACTGGATGAGAGACCGTGCCATAGCTTACTCAGAGGAACTTAGGAAGGTGAACGTTGATGCACCTGTTCTTGAGTATAAAGATGCAGTCCATGAGTTTGCTACACTTGACGTACTTCTCAGAAGCCCTCAGGCTCAGGTTTGCGCCGAGGACATTGCCATTTGGGTCAAGAAGTATATATCACTTCGAGGTCATGAATTCTCATATTGA 540 0.4537 RCVLLGVSCGANIANYVARKAVETGKLLDPVKVVAQILMYPFYVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEKEFSLDHPAANPLVPGHGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLRSPQAQVCAEDIAIWVKKYISLRGHEFSY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27130g00001 179 Pfam alpha/beta hydrolase fold 1 144 IPR013094 GO:0016787
Trme27130g00001 179 Gene3D alpha/beta hydrolase 1 174 IPR029058 -
Trme27130g00001 179 PANTHER ARYLACETAMIDE DEACETYLASE 1 144 - -
Trme27130g00001 179 SUPERFAMILY alpha/beta-Hydrolases 1 170 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27130g00001 Trme-Chr27130 3 542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27130g00001 1 179 Carbohydrate Esterase AT3G27320 87.709 2.77e-117 337