Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27129g00001 ATGTTGTTAAATGCAGGAATTGTGACATTAGGTGCACGCCATCATGATTCTTCCTTCAACTATTTATCCTCTTCAAACTCTTCCAAGCACCCCTGGATCGGACCTGTCGGTAACCGTGTAATAACGGTTGATATTAACGGTGGAGGCCAGTTTCAATCTGTCCAAGACGCCGTCAATGCTGTCCCCGACAACAATATAATGAACGTTCTTATTCAAATAAGGGCCGGATGCTACAAGTATGAATTGATCAAGCTAGCTACATGA 264 0.4318 MLLNAGIVTLGARHHDSSFNYLSSSNSSKHPWIGPVGNRVITVDINGGGQFQSVQDAVNAVPDNNIMNVLIQIRAGCYKYELIKLAT 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27129g00001 87 Gene3D - 37 86 IPR012334 -
Trme27129g00001 87 SUPERFAMILY Pectin lyase-like 36 79 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27129g00001 Trme-Chr27129 496 759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27129g00001 32 87 Carbohydrate Esterase AT5G47500 48.214 5.54e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27129g00001 - - cam:101501763 109.383