Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27099g00001 ATGGTCAATATGTGGGCTATAACCCATGATCCAAGTGTTTGGGCCGATCCATTTGTGTTTAAGCCCGAAAGATTTTTGAAGAGTGAAGGGGGTGTTGAAGTAGATGTGAGGGGTGTTGATTTGAGGCTTGCACCATTTGGAGCTGGTCGTAGGGTTTGTCCTGGTAGGAACCTAGGACTTGTGACTGTGAGTCTTTGGGTTGCTAGATTGGTTCACAAGTTTCATTGGGTCCAAGATATGACTAACCCTATTGATCTTAGTGAGGTGCTCAAGTTATCTTGTGAGATGAAGAACCCTCTCAAAGGTGTAGCTATTCCTAGGCTTGTTTAA 330 0.4424 MVNMWAITHDPSVWADPFVFKPERFLKSEGGVEVDVRGVDLRLAPFGAGRRVCPGRNLGLVTVSLWVARLVHKFHWVQDMTNPIDLSEVLKLSCEMKNPLKGVAIPRLV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27099g00001 109 Gene3D Cytochrome P450 1 104 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27099g00001 109 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 46 55 IPR017972 GO:0005506|GO:0016705
Trme27099g00001 109 PRINTS E-class P450 group I signature 3 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27099g00001 109 PRINTS E-class P450 group I signature 53 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27099g00001 109 PRINTS E-class P450 group I signature 43 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27099g00001 109 PANTHER CYTOCHROME P450 78A7-RELATED 1 107 - -
Trme27099g00001 109 Pfam Cytochrome P450 1 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme27099g00001 109 SUPERFAMILY Cytochrome P450 1 107 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27099g00001 Trme-Chr27099 865 1194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27099g00001 1 103 Cytochrome P450 AT5G09970 66.990 8.77e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27099g00001 K20619 - pvy:116124806 190.274