Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme270926g00001 CGATCTCTTTCTAGAAACCTCATCGCACGGTTACAAATCGGGTCGTCTGATTCACGCGCCACTGCGATTGACTCACTTCTATCTCTTCTCAACGAAGATGATAAGAATGTCACCATAGCGGTCGCGCAGGGTGTAGTTCCGGTGCTCGTTCGGTTACTTGATTCTTCGTCGTCGTCCGATATGAAGGAGAAAACCGTCGCGGCCATTTCTAGAGTCTCCATGGTGGAAAGCGGAAAAAACAACCTACTCGCGGAGGGGTTGTTGTTACTTAATCATTTGCTTAGGGTTTTGGATTCTGGAAGTGGTTTAGCTATAGAGAAAGCTTGTATTGCGCTTCAGGCGTTGAGTTTTACTAGAGATAAT 363 0.4656 RSLSRNLIARLQIGSSDSRATAIDSLLSLLNEDDKNVTIAVAQGVVPVLVRLLDSSSSSDMKEKTVAAISRVSMVESGKNNLLAEGLLLLNHLLRVLDSGSGLAIEKACIALQALSFTRDN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme270926g00001 121 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 121 - -
Trme270926g00001 121 SUPERFAMILY ARM repeat 7 117 IPR016024 -
Trme270926g00001 121 Gene3D - 3 121 IPR011989 -
Trme270926g00001 121 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 44 87 IPR000225 GO:0005515
Trme270926g00001 121 Pfam Armadillo/beta-catenin-like repeat 34 70 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme270926g00001 Trme-Chr270926 1 363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme270926g00001 5 121 U-box Gene Family AT1G71020 30.769 3.62e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme270926g00001 - - zju:107418090 148.288