Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27069g00001 CTTGTTGCTTTGATTTCTGTGGCAATTGAAGGAAATTCTATCCGTGTTGTGCTGGAGGAACGTCTAGAAGCTGCAAATGCTTTAAAGAAACAGATGGGGGCTGAGGCACAACTTGATAAACGCCGTATTAAAGATGATTATTTTGTTAAAATGCAGTCTTCCTCATATWTGAAAAACAAGAATGAACCAGCTGTTACATTTCCATCTGTAGGGGGTAAACAGTGCCCATTGCATACTGTTGACGTCGAAAATGATAAGGCTTTGCTCACTCCCTGTGACCGGCGTGAACAGATAAATGCACAACAGGAAAATGAAAATCTTCTGCAGAGTTCCTTATTAGAAGTGAACATGCAAAGGCAAGATTGTTCTACTGGCCCGGATAATTATTCAATCCAACAATCTATATATGCTTCTGAAAGATCAAGGTCAAATTTAAAATCATACATTGATCACTTGGCTGAACAAACTTACATGTGTAGATCATTGCCTCTTGGTTTGGATCGGAGAAGAAACCGATACTGGCAATTCACTACTTCTGCTTCTCAAAATGATCCAGGCTGTGGTAGGATATTTGTGGAATTGCGTGATGGCTGTTGGAAGCTGATCGATTCTGAAGAGGGTCCAAGGATGGGTTGGATCCATGATCAATCTATTGTGGGAAGCCACACTGATTCCACAAGAACCCACAACCTTCTAGCTAGTCAACAACAACTCTAA 717 0.4086 LVALISVAIEGNSIRVVLEERLEAANALKKQMGAEAQLDKRRIKDDYFVKMQSSSYXKNKNEPAVTFPSVGGKQCPLHTVDVENDKALLTPCDRREQINAQQENENLLQSSLLEVNMQRQDCSTGPDNYSIQQSIYASERSRSNLKSYIDHLAEQTYMCRSLPLGLDRRRNRYWQFTTSASQNDPGCGRIFVELRDGCWKLIDSEEGPRMGWIHDQSIVGSHTDSTRTHNLLASQQQL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27069g00001 238 Coils Coil 15 35 - -
Trme27069g00001 238 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 207 IPR044977 GO:0006357
Trme27069g00001 238 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 160 197 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27069g00001 Trme-Chr27069 3 1034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27069g00001 1 207 Homeobox Transcription Factor Family AT5G44180 46.667 1.84e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27069g00001 - - lja:Lj0g3v0211729.1 322.398