Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme270631g00001 ATGTTTGAGTCATTGGAGAAACTCAAACCTCATGTACTCGAAATCTTTGATGGTGAATCTGGAGAGGATATCTGCGTAAGGTTTCGTGAACTTGAGAAGCTAATCATTGATGCATCAAGCAAAGTTTTTTGGGAATTTGGATTGCAAATCGAAGGAAACGTCGATGGTTTTCTTCCACCTCCACAAGATGGTTCTGTTCCGAAAATAGTAAGATATGCTGTTAACTATCTTAAGTACTTATCCACAGAGAATTACAGAAAAACAATGGCTAAGGTTCTAAGAACAGAACAAACATGGAAAACCGAGTTGATGTTATCGTCAAA 323 0.3746 MFESLEKLKPHVLEIFDGESGEDICVRFRELEKLIIDASSKVFWEFGLQIEGNVDGFLPPPQDGSVPKIVRYAVNYLKYLSTENYRKTMAKVLRTEQTWKTELMLSS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme270631g00001 107 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 95 IPR004140 GO:0000145|GO:0006887
Trme270631g00001 107 Gene3D Exocyst complex component Exo70 1 106 - -
Trme270631g00001 107 Pfam Exo70 exocyst complex subunit 1 100 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme270631g00001 107 SUPERFAMILY Cullin repeat-like 1 95 IPR016159 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme270631g00001 1 102 EXO70 exocyst subunit family AT4G31540 34.314 4.40e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme270631g00001 - - vvo:131594125 214.157