Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27044g00001 GTGGAGCAGCTACATAAGATATTTAAGCTATGTGGCTCTCCATCTGAAGAATATTGGAAAAAGTTAAAGTTGCCACATGCTACCATTTTTAAGCCCCAACAATCATACAAGCGATGCATATCGGAGACATTTAAGAATTTTCCACCGTCATCCCTGCCACTGATTGAAACCCTTCTCACAATTGATCCAGATGAACGTCTGACTGCCATCGCTGCGTTGCATAGTGAATTATTTACTACAAAACCTTATGCTTGTGTTCCCTCTAGCCTTCCTAAATATCCTCCCAGCAAAGAGATGGATGCAAAGTTACGAGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAGAGCAAATGCTGATGGTGTCAAGAAATCTCGTCCACGTGAGCGAGTAGGGAGGGGACTTCCCATTCCAGATGCCAATGCTGAA 429 0.4359 VEQLHKIFKLCGSPSEEYWKKLKLPHATIFKPQQSYKRCISETFKNFPPSSLPLIETLLTIDPDERLTAIAALHSELFTTKPYACVPSSLPKYPPSKEMDAKLRDEEARRLRAAGRANADGVKKSRPRERVGRGLPIPDANAE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27044g00001 143 MobiDBLite consensus disorder prediction 111 143 - -
Trme27044g00001 143 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Trme27044g00001 143 MobiDBLite consensus disorder prediction 111 133 - -
Trme27044g00001 143 SUPERFAMILY Protein kinase-like (PK-like) 2 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27044g00001 Trme-Chr27044 200 1224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27044g00001 2 116 Core Cell Cycle Gene Families AT5G10270 41.379 8.88e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27044g00001 K08819 - vvo:131595530 258.07